Oncomine Colon cfDNA Assay

Variant type

Oncomine Gene class

Oncomine Variant class

Annotation criteria

Missense hotspot mutation

Gain-of-Function

Loss-of-Function

Hotspot

  • Positive mutation call

  • Functional impact is missense

  • Transcript and codon position occur in predefined missense hotspot list

In-frame hotspot mutation

Gain-of-Function

Loss-of-Function

Hotspot

  • Positive mutation call

  • Function, transcript, and coding syntax occur in predefined in-frame hotspot list

Loss-of-function truncating hotspot mutation

Loss-of-Function

Truncating

  • Positive mutation call

  • Function, transcript, and coding syntax occur in predefined truncating hotspot list

  • Occurs in a loss-of-function gene

MNV hotspot mutation

Gain-of-Function

Loss-of-Function

Hotspot

  • Positive mutation call

  • Transcript and coding syntax occur in MNV hotspot list

ERBB2 exon 20 insertion[1]

Gain-of-Function

ERBB2Exon20Insertion

  • Positive mutation call

  • Functional impact is nonframeshift insertion, nonframeshift block substitution

  • Insertion impacts codons 770–783 of ERBB2[2]

1 For more information, see .
2 In some cases the assay design may not cover the entire codon range.