CNV p-value filter

This filter can be added to the Default Somatic Variants view filter chain in the software to detect copy number depletion (loss) when using the AmpliSeq™ somatic custom CNV analysis workflow or assay.

Filter conditions include the ability to set the p-value of detected copy number at specific value. Stringent p-values settings (that is, settings with low p-values cutoffs) can help return CNVs with greater statistical significance. In addition, the range boundary values can be included or excluded, and unannotated variants can be included or excluded in filtered analysis results.

The filter returns copy number losses that have low p-values with high statistical significance, and other variants.